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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
Target of assay
53
transcription factor
51
histone
51
histone modification
33
control
27
narrow histone mark
24
broad histone mark
5
RNA binding protein
3
chromatin remodeller
Date released
108
November, 2017
58
August, 2017
40
October, 2018
39
October, 2019
28
May, 2019
27
November, 2018
25
December, 2017
23
May, 2020
18
April, 2019
14
May, 2021
13
August, 2021
12
June, 2019
10
January, 2019
8
February, 2018
6
December, 2018
6
September, 2017
5
May, 2024
5
November, 2020
3
February, 2021
3
July, 2019
3
November, 2019
3
October, 2017
Available data
33
bam
25
fastq
8
tagAlign
5
bed bed3+
5
bed narrowPeak
5
bigWig
4
bigBed narrowPeak
Organism
38
Homo sapiens
Biosample type
17
in vitro differentiated cells
14
tissue
5
cell line
1
primary cell
1
stem cell
Organ
23
liver
6
epithelium
4
embryo
Project
38
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
33
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
7
hepatocyte
3
Hepatic endoderm
2
pancreatic endoderm
2
Posterior foregut
1
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tissue
liver
10
right lobe of liver
4
cell line
HepG2
5
primary cell
hepatocyte
1
stem cell
hESC
1
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