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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
Assay category
128
DNA binding
1
3D chromatin structure
Target of assay
70
transcription factor
31
histone
31
histone modification
25
control
16
narrow histone mark
15
broad histone mark
6
RNA binding protein
5
chromatin remodeller
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
128
bam
128
fastq
102
bed narrowPeak
102
bigWig
80
bigBed narrowPeak
15
bed bed3+
Organism
128
Homo sapiens
Biosample type
55
tissue
43
in vitro differentiated cells
27
cell line
3
stem cell
Organ
63
liver
27
blood
27
bodily fluid
19
epithelium
13
embryo
7
spleen
Project
128
AMP
Genome assembly (visualization)
107
GRCh38
107
hg19
Lab
128
AMP-T2D consortium
Audit category:
28
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
128 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
spleen
7
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
cell line
GM12878
27
stem cell
hESC
3
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