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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
276
ChIP-seq
Assay category
276
DNA binding
33
DNA accessibility
30
Transcription
6
3D chromatin structure
Target of assay
196
histone
196
histone modification
141
narrow histone mark
55
broad histone mark
43
control
35
transcription factor
7
recombinant protein
2
RNA binding protein
2
chromatin remodeller
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
253
bam
206
bigWig
204
bed narrowPeak
88
bigBed narrowPeak
49
tagAlign
34
fastq
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
276
Homo sapiens
Biosample type
202
tissue
50
cell line
24
primary cell
Organ
84
brain
59
limb
40
blood vessel
40
vasculature
35
nerve
27
blood
27
bodily fluid
24
epithelium
23
artery
21
kidney
17
vein
13
pancreas
7
spleen
5
heart
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
276
AMP
Genome assembly (visualization)
208
hg19
206
GRCh38
Lab
276
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
1
inconsistent control
BIOSAMPLE
ASSAY
276 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
35
tibial artery
23
islet of Langerhans
21
spleen
7
brain
5
+ See 78 more…
cell line
GM12878
27
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
endothelial cell of umbilical vein
17
epithelial cell of proximal tubule
7
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