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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
3
ATAC-seq
1
Hi-C
Assay category
56
Transcription
3
DNA accessibility
1
3D chromatin structure
Date released
190
August, 2021
156
May, 2022
143
February, 2021
140
February, 2023
109
August, 2017
92
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
13
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
76
fastq
bam
33
bigWig
bed narrowPeak
30
bigBed narrowPeak
19
zippedFastqFolder
Organism
60
Homo sapiens
Biosample type
59
primary cell
1
cell line
Organ
19
epithelium
19
pancreas
1
liver
Project
59
HPAP
1
AMP
Genome assembly (visualization)
3
GRCh38
Lab
59
Klaus Kaestner, Upenn
1
AMP-T2D consortium
files.file_type!
bam
bed narrowPeak
BIOSAMPLE
ASSAY
60 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
cell line
HepG2
1
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