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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
5
total RNA-seq
2
single cell RNA-seq
1
Hi-C
Assay category
27
DNA binding
7
Transcription
1
3D chromatin structure
Target of assay
25
transcription factor
2
RNA binding protein
2
chromatin remodeller
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
32
bam
32
bigWig
28
fastq
27
bed narrowPeak
27
bigBed narrowPeak
7
tsv
Organism
35
Homo sapiens
Biosample type
28
cell line
tissue
5
primary cell
2
in vitro differentiated cells
Organ
27
blood
27
bodily fluid
6
liver
5
epithelium
Project
35
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
35
AMP-T2D consortium
Audit category:
2
audit script error
2
inconsistent ontology term
1
inconsistent control
month_released!
January, 2018
biosample_type!
tissue
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
Hi-C
cell line
GM12878
27
HepG2
1
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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