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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
351
ChIP-seq
1
Hi-C
Assay category
351
DNA binding
1
3D chromatin structure
Target of assay
269
transcription factor
66
recombinant protein
59
control
39
RNA binding protein
18
histone
18
histone modification
17
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
352
fastq
350
bam
304
bigWig
282
bed narrowPeak
282
bigBed narrowPeak
64
bed broadPeak
64
bigBed broadPeak
12
tagAlign
3
tar
Organism
352
Homo sapiens
Biosample type
343
cell line
tissue
9
primary cell
Organ
316
liver
27
blood
27
bodily fluid
9
brain
6
epithelium
6
vasculature
3
blood vessel
Project
352
AMP
Genome assembly (visualization)
302
hg19
250
GRCh38
Lab
352
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
January, 2018
biosample_type!
tissue
BIOSAMPLE
ASSAY
352 results
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Clear Filters
ChIP-seq
Hi-C
cell line
HepG2
315
1
GM12878
27
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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