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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
small RNA-seq
4
total RNA-seq
3
Hi-C
3
single cell RNA-seq
2
RRBS
1
ATAC-seq
1
FAIRE-seq
Assay category
11
Transcription
3
3D chromatin structure
2
DNA accessibility
2
DNA methylation
Target of assay
3
control
Date released
91
November, 2017
86
October, 2019
30
June, 2019
28
May, 2019
18
July, 2019
16
October, 2017
12
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
0
December, 2018
Available data
16
bigWig
13
bam
11
tsv
3
bed bed3+
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
Organism
18
Homo sapiens
Biosample type
11
tissue
7
primary cell
Organ
27
blood
27
bodily fluid
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
11
liver
10
musculature of body
7
spleen
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
18
AMP
Genome assembly (visualization)
17
hg19
12
GRCh38
Lab
18
AMP-T2D consortium
month_released!
September, 2018
BIOSAMPLE
ASSAY
18 results
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small RNA-seq
total RNA-seq
Hi-C
single cell RNA-seq
RRBS
ATAC-seq
FAIRE-seq
tissue
frontal cortex
1
1
1
diencephalon
1
1
temporal lobe
1
1
brain
1
cerebellum
1
+ See 2 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 1 more…
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