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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
93
DNA binding
10
DNA accessibility
Target of assay
91
transcription factor
23
RNA binding protein
15
recombinant protein
9
chromatin remodeller
3
other context
3
other post-translational modification
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
123
fastq
121
bam
110
bigWig
103
bed narrowPeak
103
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
103
Homo sapiens
Biosample type
83
cell line
20
tissue
Organ
51
liver
39
blood
39
bodily fluid
7
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
103
AMP
Genome assembly (visualization)
102
GRCh38
101
hg19
Lab
103
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
103 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
44
GM12878
39
tissue
spleen
6
1
liver
4
2
body of pancreas
2
brain
2
omental fat pad
1
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