Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
34
DNA binding
4
Transcription
2
DNA accessibility
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
670
February, 2021
411
August, 2017
406
November, 2017
314
October, 2019
296
May, 2020
218
June, 2019
168
July, 2018
164
May, 2021
151
August, 2021
120
May, 2019
108
July, 2019
103
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
40
bam
35
bigWig
35
fastq
32
bed narrowPeak
31
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
41
Homo sapiens
Biosample type
28
cell line
7
tissue
6
primary cell
Organ
27
blood
27
bodily fluid
7
spleen
6
connective tissue
1
liver
Project
41
AMP
Genome assembly (visualization)
36
GRCh38
36
hg19
Lab
41
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
41 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
cell line
GM12878
27
HepG2
1
tissue
spleen
7
primary cell
osteoblast
4
1
1
Download