Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
125
total RNA-seq
51
single cell RNA-seq
31
ChIP-seq
2
RNA microarray
Assay category
187
DNA accessibility
176
Transcription
31
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
387
bam
379
bigWig
210
bed narrowPeak
210
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
173
tsv
50
fastq
Organism
396
Homo sapiens
Biosample type
286
tissue
108
primary cell
2
in vitro differentiated cells
Organ
161
pancreas
84
kidney
59
epithelium
43
musculature of body
35
heart
32
limb
30
brain
20
connective tissue
18
ureter
7
eye
7
liver
7
vasculature
5
blood vessel
2
artery
1
adipose tissue
Project
396
AMP
Genome assembly (visualization)
379
GRCh38
356
hg19
Lab
396
AMP-T2D consortium
Audit category:
34
inconsistent ontology term
4
audit script error
BIOSAMPLE
ASSAY
396 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
total RNA-seq
single cell RNA-seq
ChIP-seq
RNA microarray
tissue
islet of Langerhans
120
heart
18
muscle of arm
17
kidney
13
1
muscle of leg
13
+ See 37 more…
primary cell
pancreatic beta cell
9
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
pancreatic alpha cell
7
+ See 32 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
Download