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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
3
single cell RNA-seq
2
RNA microarray
1
Hi-C
Assay category
4
DNA accessibility
3
Transcription
1
3D chromatin structure
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
9
tsv
6
bam
bigWig
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
10
Homo sapiens
Biosample type
8
tissue
2
in vitro differentiated cells
Organ
5
pancreas
3
kidney
1
epithelium
Project
10
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
5
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
4
audit script error
2
inconsistent ontology term
month_released!
June, 2018
files.file_type!
bigWig
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ATAC-seq
single cell RNA-seq
RNA microarray
Hi-C
tissue
islet of Langerhans
4
1
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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