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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
total RNA-seq
2
single cell RNA-seq
Assay category
32
Transcription
Date released
707
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
284
October, 2019
205
February, 2023
200
May, 2022
189
August, 2021
168
July, 2018
137
June, 2019
115
May, 2019
97
July, 2019
94
December, 2017
88
November, 2018
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
57
April, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
32
tsv
5
bam
5
bigWig
Organism
32
Homo sapiens
Biosample type
25
tissue
5
primary cell
2
in vitro differentiated cells
Organ
12
brain
6
epithelium
6
liver
3
blood vessel
3
heart
kidney
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
nerve
1
pancreas
1
spinal cord
Project
32
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
32
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
2
audit script error
organ_slims!
kidney
BIOSAMPLE
ASSAY
32 results
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total RNA-seq
single cell RNA-seq
tissue
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
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primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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