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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
5
total RNA-seq
2
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
30
DNA accessibility
17
Transcription
6
DNA methylation
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
45
fastq
11
tsv
9
bam
7
bigWig
3
bed narrowPeak
2
bed bed3+
1
bed bed3
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
54
Homo sapiens
Biosample type
549
tissue
102
cell line
54
primary cell
26
in vitro differentiated cells
Organ
9
connective tissue
6
epithelium
6
pancreas
Project
45
HPAP
9
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
45
Klaus Kaestner, Upenn
9
AMP-T2D consortium
Audit category:
27
audit script error
BIOSAMPLE
ASSAY
54 results
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snATAC-seq
single cell RNA-seq
WGBS
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
primary cell
Langerhans cell
27
12
osteoblast
5
2
1
1
pancreatic alpha cell
6
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