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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
31
total RNA-seq
3
ATAC-seq
Assay category
71
Transcription
DNA binding
3
DNA accessibility
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
56
fastq
19
zippedFastqFolder
18
bigWig
15
bam
15
tsv
Organism
74
Homo sapiens
Biosample type
59
primary cell
15
in vitro differentiated cells
Organ
19
epithelium
19
pancreas
4
embryo
Project
59
HPAP
15
AMP
Genome assembly (visualization)
18
GRCh38
15
hg19
Lab
59
Klaus Kaestner, Upenn
15
AMP-T2D consortium
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
74 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
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