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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
19
total RNA-seq
10
MeRIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
19
Transcription
2
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
21
bam
20
bigWig
19
tsv
15
fastq
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
31
Homo sapiens
Biosample type
15
in vitro differentiated cells
6
cell line
6
primary cell
4
tissue
Organ
10
pancreas
6
connective tissue
6
epithelium
4
embryo
Project
31
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
21
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
31 results
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Clear Filters
total RNA-seq
MeRIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
cell line
EndoC_BH1
6
primary cell
osteoblast
4
1
1
tissue
islet of Langerhans
4
See all biosamples
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