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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
55
ChIP-seq
15
total RNA-seq
Assay category
55
DNA binding
Target of assay
35
histone
35
histone modification
19
narrow histone mark
16
broad histone mark
16
control
4
RNA binding protein
4
transcription factor
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
55
bam
39
bed narrowPeak
39
bigWig
24
fastq
23
bigBed narrowPeak
Organism
55
Homo sapiens
Biosample type
31
primary cell
24
in vitro differentiated cells
Organ
12
connective tissue
10
musculature of body
9
embryo
6
epithelium
5
heart
3
eye
3
kidney
Project
55
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
55
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
5
cardiac muscle cell
3
epithelial cell of proximal tubule
3
+ See 2 more…
in vitro differentiated cells
pancreatic endoderm
9
definitive endodermal cell
3
embryonic stem cell
3
endocrine cell
3
posterior foregut
3
+ See 1 more…
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