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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
16
ChIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
19
Transcription
16
DNA binding
2
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
narrow histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
37
bam
36
bigWig
31
fastq
19
tsv
18
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
37
Homo sapiens
Biosample type
31
in vitro differentiated cells
6
primary cell
Organ
10
embryo
6
connective tissue
Project
37
AMP
Genome assembly (visualization)
37
GRCh38
37
hg19
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
37 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
pancreatic endoderm
4
6
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
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primary cell
osteoblast
4
1
1
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