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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
41
total RNA-seq
14
ATAC-seq
Assay category
48
DNA binding
41
Transcription
14
DNA accessibility
Target of assay
48
histone
48
histone modification
25
broad histone mark
23
narrow histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
103
bam
103
bigWig
103
fastq
62
bed narrowPeak
41
tsv
14
bigBed narrowPeak
Organism
103
Homo sapiens
Biosample type
72
primary cell
31
in vitro differentiated cells
Organ
72
pancreas
61
epithelium
10
embryo
Project
103
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
103
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
103 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
in vitro differentiated cells
pancreatic endoderm
6
4
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
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