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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
15
total RNA-seq
5
ATAC-seq
Assay category
24
DNA binding
15
Transcription
5
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
44
bam
39
fastq
31
bigWig
21
bed narrowPeak
15
tsv
Organism
44
Homo sapiens
Biosample type
44
in vitro differentiated cells
40
tissue
16
cell line
Organ
13
embryo
Project
44
AMP
Genome assembly (visualization)
36
GRCh38
36
hg19
Lab
44
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
9
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
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