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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
12
ATAC-seq
Assay category
46
DNA binding
12
DNA accessibility
Target of assay
35
histone
35
histone modification
19
narrow histone mark
16
broad histone mark
11
transcription factor
1
RNA binding protein
Date released
313
November, 2017
173
October, 2019
142
August, 2017
133
May, 2021
130
June, 2019
93
May, 2019
73
November, 2018
72
December, 2017
65
February, 2023
47
April, 2019
46
September, 2018
45
October, 2018
42
August, 2021
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
6
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
138
tsv
88
bam
78
bigWig
58
bed narrowPeak
39
fastq
24
tagAlign
5
bed bed3+
2
bedpe bed3+
1
hic
1
vcf
Organism
58
Homo sapiens
Biosample type
41
in vitro differentiated cells
14
cell line
3
primary cell
Organ
kidney
17
liver
6
embryo
3
epithelium
2
connective tissue
Project
58
AMP
Genome assembly (visualization)
57
hg19
42
GRCh38
Lab
42
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent control read length
organ_slims!
kidney
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ChIP-seq
ATAC-seq
in vitro differentiated cells
neural progenitor cell
13
10
pancreatic endoderm
6
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
+ See 4 more…
cell line
HepG2
14
primary cell
hepatocyte
3
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