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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
15
total RNA-seq
1
Hi-C
Assay category
50
DNA binding
15
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
16
histone
16
histone modification
12
control
broad histone mark
8
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
66
fastq
65
bam
53
bigWig
38
bed narrowPeak
30
bigBed narrowPeak
15
tsv
Organism
66
Homo sapiens
Biosample type
31
in vitro differentiated cells
28
cell line
7
tissue
Organ
27
blood
27
bodily fluid
10
embryo
7
spleen
1
liver
Project
66
AMP
Genome assembly (visualization)
53
GRCh38
53
hg19
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
1
inconsistent control read length
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
in vitro differentiated cells
pancreatic endoderm
6
4
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
+ See 2 more…
cell line
GM12878
27
HepG2
1
tissue
spleen
7
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