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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
total RNA-seq
12
ChIP-seq
11
ATAC-seq
3
single cell RNA-seq
Assay category
24
Transcription
12
DNA binding
11
DNA accessibility
Target of assay
12
control
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
69
bam
69
fastq
57
bigWig
bed narrowPeak
21
bigBed narrowPeak
20
tsv
Organism
47
Homo sapiens
Biosample type
23
in vitro differentiated cells
16
tissue
8
cell line
Organ
14
kidney
7
embryo
5
liver
3
blood
3
bodily fluid
1
adipose tissue
1
connective tissue
1
spleen
Project
47
AMP
Genome assembly (visualization)
32
GRCh38
21
hg19
Lab
33
AMP-T2D consortium
14
Katalin Susztak, Upenn
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
47 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
in vitro differentiated cells
pancreatic endoderm
4
3
definitive endodermal cell
2
1
embryonic stem cell
2
1
endocrine cell
2
1
posterior foregut
2
1
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tissue
kidney
11
3
adipose tissue
1
spleen
1
cell line
HepG2
5
GM12878
3
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