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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
total RNA-seq
19
ChIP-seq
Assay category
28
Transcription
19
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
0
January, 2021
Available data
47
bam
47
bigWig
31
fastq
28
tsv
19
bed narrowPeak
Organism
47
Homo sapiens
Biosample type
33
in vitro differentiated cells
9
tissue
5
cell line
Organ
10
embryo
6
pancreas
3
epithelium
2
heart
2
musculature of body
1
blood vessel
1
liver
1
vasculature
Project
42
AMP
5
T1D
Genome assembly (visualization)
63
hg19
47
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
47 results
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Clear Filters
total RNA-seq
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
4
6
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
+ See 4 more…
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
cell line
EndoC_BH1
2
1
early embryonic cell
2
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