Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
16
snATAC-seq
15
total RNA-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
24
DNA binding
18
Transcription
16
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
43
fastq
42
bam
34
bigWig
18
tsv
16
bed narrowPeak
1
bedpe bed3+
Organism
59
Homo sapiens
Biosample type
40
in vitro differentiated cells
11
primary cell
8
tissue
Organ
13
embryo
11
pancreas
8
blood
8
bodily fluid
3
epithelium
1
adipose tissue
1
connective tissue
Project
43
AMP
16
T1D
Genome assembly (visualization)
34
GRCh38
34
hg19
Lab
43
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
59 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
total RNA-seq
single cell RNA-seq
pCHi-C
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 3 more…
primary cell
peripheral blood mononuclear cell
8
pancreatic alpha cell
2
pancreatic acinar cell
1
tissue
islet of Langerhans
4
pancreas
4
See all biosamples
Download