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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
15
total RNA-seq
7
ATAC-seq
Assay category
39
DNA binding
15
Transcription
7
DNA accessibility
Target of assay
28
histone
28
histone modification
18
broad histone mark
11
control
10
narrow histone mark
Date released
406
November, 2017
397
May, 2021
341
May, 2020
314
August, 2021
310
October, 2019
286
August, 2017
260
February, 2021
200
June, 2019
200
May, 2022
191
February, 2023
166
July, 2018
120
May, 2019
94
December, 2017
90
July, 2019
87
November, 2018
80
April, 2019
73
September, 2018
62
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
55
fastq
53
bam
44
bigWig
27
bed narrowPeak
15
tsv
14
tagAlign
6
bigBed narrowPeak
4
bed broadPeak
Organism
61
Homo sapiens
Biosample type
39
in vitro differentiated cells
22
tissue
Organ
16
brain
13
embryo
5
pancreas
1
adipose tissue
connective tissue
1
spleen
Project
61
AMP
Genome assembly (visualization)
44
GRCh38
43
hg19
Lab
60
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
61 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
tissue
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
spleen
1
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