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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
16
small RNA-seq
12
WGBS
6
ATAC-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
72
Transcription
18
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
72
tsv
64
bam
63
bigWig
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
Organism
102
Homo sapiens
Biosample type
102
tissue
31
primary cell
Organ
23
brain
23
heart
12
adipose tissue
12
connective tissue
10
blood vessel
10
vasculature
9
liver
9
musculature of body
8
limb
7
pancreas
4
kidney
3
artery
1
eye
1
nerve
1
pericardium
1
spinal cord
Project
102
AMP
Genome assembly (visualization)
61
GRCh38
60
hg19
Lab
102
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
April, 2020
BIOSAMPLE
ASSAY
102 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
RRBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
4
2
1
omental fat pad
5
1
right lobe of liver
3
2
1
subcutaneous adipose tissue
5
1
body of pancreas
3
2
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