Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
total RNA-seq
Assay category
198
Transcription
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
0
June, 2019
Available data
513
bigWig
495
bam
343
bed narrowPeak
210
bigBed narrowPeak
198
tsv
189
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
90
tagAlign
Organism
198
Homo sapiens
Biosample type
79
in vitro differentiated cells
63
tissue
52
primary cell
4
cell line
Organ
41
pancreas
12
brain
6
epithelium
6
heart
3
blood vessel
3
connective tissue
3
limb
3
vasculature
2
adipose tissue
2
artery
2
embryo
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
147
AMP
51
T1D
Genome assembly (visualization)
173
GRCh38
173
hg19
Lab
147
AMP-T2D consortium
51
Kyle Gaulton, UCSD
Audit category:
70
inconsistent ontology term
BIOSAMPLE
ASSAY
198 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
+ See 8 more…
tissue
islet of Langerhans
36
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
+ See 23 more…
primary cell
monocyte
51
embryonic stem cell
1
cell line
EndoC_BH1
4
See all biosamples
Download