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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
total RNA-seq
47
ChIP-seq
ATAC-seq
1
single cell RNA-seq
Assay category
52
Transcription
47
DNA binding
Target of assay
44
histone
44
histone modification
27
broad histone mark
17
narrow histone mark
3
control
Date released
693
February, 2021
406
August, 2017
406
November, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
102
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
68
fastq
66
bam
64
bigWig
51
tsv
38
bed narrowPeak
14
tagAlign
6
bigBed narrowPeak
3
bed broadPeak
1
csv
Organism
99
Homo sapiens
Biosample type
59
primary cell
40
tissue
Organ
59
pancreas
47
epithelium
27
brain
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
99
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
99
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
36
missing controlled_by
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
99 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
4
13
pancreatic endocrine cell
11
pancreatic acinar cell
2
8
pancreatic alpha cell
10
pancreatic beta cell
10
+ See 1 more…
tissue
brain
15
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
+ See 21 more…
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