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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
total RNA-seq
8
ATAC-seq
4
ChIP-seq
Assay category
25
Transcription
8
DNA accessibility
4
DNA binding
Target of assay
8
histone
8
histone modification
broad histone mark
3
control
1
narrow histone mark
Date released
715
February, 2021
346
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
268
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
85
November, 2018
78
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
41
September, 2018
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
May, 2024
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
12
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
25
tsv
10
fastq
9
bam
8
bigWig
6
bed narrowPeak
3
tagAlign
1
bed broadPeak
Organism
37
Homo sapiens
Biosample type
37
tissue
Organ
17
brain
6
pancreas
3
adipose tissue
3
blood vessel
3
connective tissue
3
heart
3
limb
3
vasculature
2
artery
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
1
spleen
Project
37
AMP
Genome assembly (visualization)
8
GRCh38
7
hg19
Lab
36
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
missing controlled_by
audit.NOT_COMPLIANT.category!
missing controlled_by
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
37 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
body of pancreas
1
4
brain
4
cerebellum (Hemisphere)
1
1
omental fat pad
1
1
Ammon's horn
1
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