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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
total RNA-seq
10
snATAC-seq
9
single cell RNA-seq
3
Hi-C
1
MPRA
Assay category
31
Transcription
10
DNA accessibility
3
3D chromatin structure
Date released
649
February, 2021
411
August, 2017
406
November, 2017
396
May, 2021
341
May, 2020
306
October, 2019
227
August, 2021
200
May, 2022
183
June, 2019
169
February, 2023
168
July, 2018
99
May, 2019
94
December, 2017
88
November, 2018
83
July, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
22
tsv
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
43
Homo sapiens
Biosample type
41
tissue
3
primary cell
1
cell line
Organ
19
lung
12
brain
4
pancreas
3
blood vessel
3
epithelium
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
23
AMP
19
LungMap
3
HPAP
Genome assembly (visualization)
3
hg19
Lab
23
AMP-T2D consortium
19
Xin Sun, UCSD
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
1
inconsistent ontology term
organ_slims!
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BIOSAMPLE
ASSAY
45 results
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Clear Filters
total RNA-seq
snATAC-seq
single cell RNA-seq
Hi-C
MPRA
tissue
lung
10
9
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
+ See 18 more…
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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