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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
total RNA-seq
40
single cell RNA-seq
16
snATAC-seq
3
ATAC-seq
Assay category
81
Transcription
19
DNA accessibility
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
41
fastq
25
tsv
19
zippedFastqFolder
3
bigWig
Organism
100
Homo sapiens
Biosample type
67
primary cell
33
tissue
Organ
28
pancreas
19
epithelium
12
brain
8
blood
8
bodily fluid
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
59
HPAP
25
AMP
16
T1D
Genome assembly (visualization)
3
GRCh38
Lab
59
Klaus Kaestner, Upenn
25
AMP-T2D consortium
16
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
100 results
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Clear Filters
total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
peripheral blood mononuclear cell
8
pancreatic beta cell
1
1
tissue
islet of Langerhans
4
pancreas
4
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
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