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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
40
total RNA-seq
3
ATAC-seq
Assay category
80
Transcription
3
DNA accessibility
Date released
712
February, 2021
399
May, 2021
357
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
41
fastq
24
tsv
19
zippedFastqFolder
3
bigWig
Organism
83
Homo sapiens
Biosample type
59
primary cell
24
tissue
Organ
20
pancreas
19
epithelium
12
brain
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
liver
1
nerve
1
spinal cord
Project
59
HPAP
24
AMP
Genome assembly (visualization)
3
GRCh38
Lab
59
Klaus Kaestner, Upenn
24
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
liver
month_released!
July, 2019
BIOSAMPLE
ASSAY
83 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
tissue
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
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