Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ATAC-seq
27
snATAC-seq
Assay category
753
Transcription
149
DNA accessibility
58
DNA binding
6
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
63
bam
46
bigWig
27
fastq
18
bed narrowPeak
4
bed bedgraph
2
bed bed3
Organism
149
Homo sapiens
Biosample type
128
primary cell
9
cell line
8
tissue
4
in vitro differentiated cells
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
6
limb
5
connective tissue
1
liver
Project
122
AMP
27
HPAP
Genome assembly (visualization)
67
hg19
18
GRCh38
Lab
122
AMP-T2D consortium
27
Klaus Kaestner, Upenn
Audit category:
27
audit script error
4
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
149 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
27
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
+ See 25 more…
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
+ See 3 more…
in vitro differentiated cells
adipocyte
4
See all biosamples
Download