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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
523
total RNA-seq
18
single cell RNA-seq
Assay category
541
Transcription
45
DNA accessibility
8
DNA binding
6
DNA methylation
Date released
541
February, 2021
190
May, 2020
173
August, 2021
168
July, 2018
98
May, 2021
90
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
28
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
13
March, 2020
9
April, 2020
6
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
528
tsv
523
bam
523
bigWig
12
fastq
6
csv
5
txt
Organism
541
Homo sapiens
Biosample type
450
tissue
78
cell line
in vitro differentiated cells
13
primary cell
Organ
445
connective tissue
386
adipose tissue
58
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
26
epithelium
26
pancreas
5
kidney
1
liver
Project
529
AMP
12
HPAP
Genome assembly (visualization)
523
GRCh38
523
hg19
Lab
529
AMP-T2D consortium
12
Klaus Kaestner, Upenn
Audit category:
26
inconsistent ontology term
5
audit script error
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
541 results
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total RNA-seq
single cell RNA-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
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cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
primary cell
Langerhans cell
12
osteoblast
1
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