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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
638
total RNA-seq
19
single cell RNA-seq
Assay category
657
Transcription
154
DNA accessibility
8
DNA binding
6
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
554
tsv
545
bam
545
bigWig
88
fastq
9
txt
6
csv
Organism
657
Homo sapiens
Biosample type
464
tissue
89
primary cell
78
cell line
26
in vitro differentiated cells
Organ
453
connective tissue
386
adipose tissue
68
pancreas
65
epithelium
62
bone element
53
heart
52
artery
52
blood vessel
52
vasculature
5
kidney
4
eye
4
skeleton
1
liver
Project
564
AMP
88
HPAP
5
T1D
Genome assembly (visualization)
545
GRCh38
545
hg19
Lab
564
AMP-T2D consortium
88
Klaus Kaestner, Upenn
5
Kyle Gaulton, UCSD
Audit category:
46
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
657 results
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Clear Filters
total RNA-seq
single cell RNA-seq
tissue
adipose tissue
381
bone tissue
58
islet of Langerhans
5
kidney
5
visceral abdominal adipose tissue
3
+ See 9 more…
primary cell
exocrine cell
39
pancreatic alpha cell
27
Langerhans cell
12
pancreatic beta cell
10
osteoblast
1
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
5
immature adipocyte
2
preadipocyte
1
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