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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
84
RNA microarray
22
ATAC-seq
8
ChIP-seq
6
single cell RNA-seq
3
snDrop-seq
2
pCHi-C
Assay category
22
DNA accessibility
8
DNA binding
6
Transcription
Target of assay
5
transcription factor
3
control
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
151
May, 2020
125
February, 2021
120
May, 2019
115
May, 2021
94
December, 2017
94
February, 2023
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
48
July, 2018
47
September, 2018
46
March, 2020
43
April, 2018
41
November, 2019
40
May, 2022
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
5
December, 2019
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
89
txt
27
bam
23
bed narrowPeak
8
tagAlign
8
tsv
6
bigWig
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
125
Homo sapiens
Biosample type
101
tissue
18
cell line
4
in vitro differentiated cells
2
primary cell
Organ
92
bone element
14
artery
14
blood vessel
14
heart
14
vasculature
8
kidney
8
skeleton
6
connective tissue
6
limb
3
liver
Project
125
AMP
45
HPAP
Genome assembly (visualization)
29
hg19
23
GRCh38
Lab
125
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
1
inconsistent replicate
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
125 results
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Clear Filters
RNA microarray
ATAC-seq
ChIP-seq
single cell RNA-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
5
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 9 more…
cell line
smooth muscle cell of the coronary artery
8
6
HepG2
1
1
iPSC derived cell line
2
in vitro differentiated cells
adipocyte
4
primary cell
osteoblast
1
1
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