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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
snDrop-seq
1
pCHi-C
Assay category
31
DNA accessibility
18
Transcription
6
DNA methylation
Date released
200
May, 2022
178
August, 2021
164
February, 2023
162
August, 2017
143
February, 2021
133
May, 2020
107
May, 2021
97
October, 2019
56
September, 2020
47
September, 2023
42
March, 2020
29
July, 2019
29
October, 2018
28
November, 2017
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
9
October, 2017
8
February, 2018
8
June, 2019
7
January, 2018
5
December, 2019
5
November, 2018
4
December, 2018
4
July, 2018
4
November, 2020
4
September, 2017
3
March, 2019
3
May, 2023
3
October, 2022
2
March, 2023
1
August, 2018
1
August, 2022
1
January, 2019
1
November, 2019
1
September, 2018
Available data
89
txt
45
fastq
14
tsv
6
csv
4
bed bedgraph
1
bam
1
bed bed3+
Organism
143
Homo sapiens
Biosample type
93
tissue
46
primary cell
cell line
4
in vitro differentiated cells
Organ
84
bone element
8
kidney
6
epithelium
6
pancreas
5
connective tissue
1
liver
Project
98
AMP
45
HPAP
Genome assembly (visualization)
481
hg19
GRCh38
Lab
98
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
32
audit script error
assembly!
GRCh38
biosample_type!
cell line
BIOSAMPLE
ASSAY
143 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 1 more…
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
in vitro differentiated cells
adipocyte
4
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