Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
467
total RNA-seq
84
RNA microarray
13
ATAC-seq
3
snDrop-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
468
Transcription
13
DNA accessibility
Date released
569
February, 2021
411
August, 2017
295
May, 2020
283
October, 2019
275
August, 2021
226
May, 2021
218
June, 2019
168
July, 2018
120
May, 2019
108
July, 2019
105
February, 2023
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
65
May, 2022
49
April, 2018
49
March, 2020
45
November, 2019
40
May, 2024
39
February, 2018
27
November, 2018
25
February, 2020
23
October, 2017
15
May, 2023
11
September, 2017
10
November, 2020
7
December, 2018
7
January, 2018
7
January, 2019
6
December, 2019
5
March, 2019
4
August, 2018
3
June, 2018
Available data
477
bam
470
tsv
468
bigWig
84
txt
9
bed narrowPeak
4
bed bedgraph
1
bed bed3
1
bed bed3+
1
csv
Organism
569
Homo sapiens
Biosample type
540
tissue
cell line
26
in vitro differentiated cells
3
primary cell
Organ
455
connective tissue
386
adipose tissue
150
bone element
8
skeleton
6
limb
3
kidney
1
liver
Project
569
AMP
18
HPAP
Genome assembly (visualization)
481
hg19
476
GRCh38
Lab
569
AMP-T2D consortium
Audit category:
102
inconsistent ontology term
audit script error
biosample_type!
cell line
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
569 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
RNA microarray
ATAC-seq
snDrop-seq
pCHi-C
single cell RNA-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 12 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
4
primary cell
osteoblast
1
1
1
See all biosamples
Download