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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
665
total RNA-seq
84
RNA microarray
54
single cell RNA-seq
22
ATAC-seq
8
ChIP-seq
3
snDrop-seq
2
pCHi-C
Assay category
719
Transcription
22
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
670
February, 2021
411
August, 2017
406
November, 2017
319
August, 2021
314
October, 2019
296
May, 2020
246
May, 2021
218
June, 2019
168
July, 2018
120
May, 2019
108
July, 2019
106
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
61
November, 2019
57
March, 2020
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
736
bam
717
tsv
715
bigWig
89
txt
50
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
838
Homo sapiens
Biosample type
665
tissue
96
cell line
51
primary cell
26
in vitro differentiated cells
Organ
457
connective tissue
386
adipose tissue
183
pancreas
150
bone element
66
artery
66
blood vessel
66
heart
66
vasculature
59
epithelium
8
kidney
8
skeleton
6
limb
3
liver
Project
838
AMP
45
HPAP
Genome assembly (visualization)
738
hg19
732
GRCh38
Lab
838
AMP-T2D consortium
Audit category:
134
inconsistent ontology term
5
audit script error
1
inconsistent replicate
BIOSAMPLE
ASSAY
838 results
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Clear Filters
total RNA-seq
RNA microarray
single cell RNA-seq
ATAC-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
adipose tissue
381
islet of Langerhans
120
bone element
84
bone tissue
58
kidney
5
+ See 14 more…
cell line
smooth muscle cell of the coronary artery
52
8
6
EndoC_BH1
26
HepG2
1
1
iPSC derived cell line
2
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
osteoblast
1
1
1
+ See 11 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
4
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