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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
467
total RNA-seq
84
RNA microarray
13
ATAC-seq
9
single cell RNA-seq
3
snDrop-seq
2
pCHi-C
Assay category
476
Transcription
13
DNA accessibility
Date released
574
February, 2021
411
August, 2017
378
May, 2021
340
May, 2020
284
October, 2019
275
August, 2021
218
June, 2019
168
July, 2018
123
February, 2023
120
May, 2019
108
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
53
March, 2020
49
April, 2018
47
September, 2023
45
November, 2019
40
May, 2024
39
February, 2018
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
March, 2023
1
August, 2022
Available data
480
bam
478
tsv
471
bigWig
89
txt
9
bed narrowPeak
6
csv
4
bed bedgraph
4
fastq
1
bed bed3
1
bed bed3+
1
bedpe bed3+
Organism
578
Homo sapiens
Biosample type
545
tissue
cell line
27
in vitro differentiated cells
6
primary cell
Organ
456
connective tissue
387
adipose tissue
150
bone element
8
kidney
8
skeleton
6
limb
3
epithelium
3
pancreas
1
liver
Project
578
AMP
HPAP
Genome assembly (visualization)
484
hg19
479
GRCh38
Lab
578
AMP-T2D consortium
Audit category:
102
inconsistent ontology term
5
audit script error
biosample_type!
cell line
award.project!
HPAP
BIOSAMPLE
ASSAY
578 results
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Clear Filters
total RNA-seq
RNA microarray
ATAC-seq
single cell RNA-seq
snDrop-seq
pCHi-C
tissue
adipose tissue
381
bone element
84
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
+ See 13 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
4
white fat cell
1
primary cell
osteoblast
1
1
1
pancreatic alpha cell
2
pancreatic acinar cell
1
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