Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
single cell RNA-seq
6
WGBS
3
snDrop-seq
1
pCHi-C
Assay category
27
DNA accessibility
6
DNA methylation
Date released
188
February, 2023
159
August, 2021
142
May, 2022
121
February, 2021
115
August, 2017
75
May, 2021
60
October, 2019
58
May, 2020
42
March, 2020
40
May, 2024
26
July, 2019
25
February, 2020
19
September, 2020
16
January, 2021
14
November, 2017
12
May, 2023
10
April, 2020
10
November, 2020
8
October, 2017
7
August, 2020
5
March, 2023
4
January, 2018
4
July, 2018
4
March, 2019
4
October, 2022
2
December, 2019
2
November, 2019
1
April, 2019
1
August, 2022
1
December, 2018
Available data
bam
532
tsv
529
bigWig
84
txt
33
fastq
23
bed narrowPeak
8
tagAlign
2
bed bed3
2
bed bed3+
Organism
121
Homo sapiens
Biosample type
87
tissue
33
primary cell
in vitro differentiated cells
1
cell line
Organ
84
bone element
6
epithelium
6
pancreas
3
kidney
1
liver
Project
88
AMP
33
HPAP
Genome assembly (visualization)
1
hg19
Lab
88
AMP-T2D consortium
33
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
27
audit script error
biosample_type!
in vitro differentiated cells
files.file_type!
bam
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
121 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
snATAC-seq
WGBS
snDrop-seq
pCHi-C
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
primary cell
Langerhans cell
27
pancreatic alpha cell
6
cell line
HepG2
1
Download