Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
ChIP-seq
2
pCHi-C
Assay category
31
DNA accessibility
12
Transcription
6
DNA methylation
3
DNA binding
Target of assay
3
control
Date released
134
May, 2022
121
May, 2021
110
February, 2023
103
May, 2020
101
November, 2017
56
September, 2020
54
February, 2021
49
August, 2021
36
August, 2017
26
October, 2019
17
March, 2020
13
July, 2019
8
February, 2018
8
January, 2021
8
June, 2019
6
January, 2018
6
November, 2020
5
December, 2017
5
November, 2018
4
March, 2023
4
October, 2022
3
January, 2019
3
November, 2019
2
December, 2019
1
August, 2018
1
December, 2018
1
May, 2019
1
September, 2018
Available data
45
fastq
6
tsv
4
bam
4
bed bedgraph
3
tagAlign
2
bed bed3+
Organism
54
Homo sapiens
Biosample type
tissue
46
primary cell
4
cell line
4
in vitro differentiated cells
Organ
6
epithelium
6
pancreas
5
connective tissue
2
artery
2
blood vessel
2
heart
2
vasculature
1
liver
Project
45
HPAP
9
AMP
Genome assembly (visualization)
122
hg19
GRCh38
Lab
45
Klaus Kaestner, Upenn
9
AMP-T2D consortium
Audit category:
27
audit script error
biosample_type!
tissue
assembly!
GRCh38
BIOSAMPLE
ASSAY
54 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
ChIP-seq
pCHi-C
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
cell line
smooth muscle cell of the coronary artery
2
HepG2
1
iPSC derived cell line
1
in vitro differentiated cells
adipocyte
4
Download