Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
total RNA-seq
4
ATAC-seq
4
pCHi-C
2
Hi-C
Assay category
24
Transcription
4
DNA accessibility
2
3D chromatin structure
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
26
tsv
24
bam
24
bigWig
4
bed bedgraph
4
bedpe bed3+
2
hic
2
ibed
Organism
34
Homo sapiens
Biosample type
585
tissue
107
cell line
49
primary cell
34
in vitro differentiated cells
4
stem cell
Organ
8
connective tissue
Project
34
AMP
Genome assembly (visualization)
32
hg19
24
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
BIOSAMPLE
ASSAY
34 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
pCHi-C
Hi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
4
cardiomyocytes (cardiac muscle cell)
1
2
1
lymphocyte of B lineage (iPSC)
1
1
1
embryonic stem cell
1
See all biosamples
Download