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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
single cell RNA-seq
6
WGBS
1
ATAC-seq
1
pCHi-C
1
total RNA-seq
Assay category
28
DNA accessibility
6
DNA methylation
1
Transcription
Date released
206
May, 2021
147
May, 2020
101
May, 2022
88
February, 2023
72
September, 2018
59
August, 2017
55
June, 2019
36
February, 2021
34
October, 2019
28
July, 2019
19
September, 2020
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
Available data
33
fastq
7
tsv
3
bam
2
bigWig
1
bed bed3
1
bed bed3+
1
bed narrowPeak
Organism
36
Homo sapiens
Biosample type
539
tissue
96
cell line
36
primary cell
26
in vitro differentiated cells
Organ
6
epithelium
6
pancreas
3
connective tissue
Project
33
HPAP
3
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
33
Klaus Kaestner, Upenn
3
AMP-T2D consortium
Audit category:
27
audit script error
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
36 results
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snATAC-seq
WGBS
ATAC-seq
pCHi-C
total RNA-seq
primary cell
Langerhans cell
27
pancreatic alpha cell
6
osteoblast
1
1
1
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