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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
1
pCHi-C
1
total RNA-seq
Assay category
27
DNA accessibility
13
Transcription
6
DNA methylation
Date released
147
May, 2020
134
May, 2022
88
February, 2023
79
May, 2021
59
September, 2020
48
July, 2018
47
February, 2021
43
April, 2018
31
July, 2019
27
September, 2018
26
August, 2017
13
October, 2019
8
January, 2021
8
June, 2019
7
August, 2020
5
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
3
November, 2017
3
October, 2022
2
October, 2018
1
August, 2021
1
March, 2020
1
March, 2023
1
May, 2019
1
November, 2018
Available data
45
fastq
7
tsv
3
bam
2
bigWig
1
bed bed3
1
bed bed3+
bed narrowPeak
Organism
47
Homo sapiens
Biosample type
537
tissue
82
cell line
47
primary cell
26
in vitro differentiated cells
Organ
6
epithelium
6
pancreas
2
connective tissue
Project
45
HPAP
2
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
45
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
27
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bed narrowPeak
BIOSAMPLE
ASSAY
47 results
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snATAC-seq
single cell RNA-seq
WGBS
pCHi-C
total RNA-seq
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
1
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