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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
444
total RNA-seq
84
RNA microarray
74
ChIP-seq
8
ATAC-seq
6
single cell RNA-seq
3
snDrop-seq
Assay category
450
Transcription
74
DNA binding
8
DNA accessibility
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
526
bam
489
bigWig
452
tsv
89
txt
58
fastq
53
bed narrowPeak
45
bigBed narrowPeak
6
csv
Organism
619
Homo sapiens
Biosample type
619
tissue
96
cell line
50
primary cell
26
in vitro differentiated cells
Organ
467
connective tissue
409
adipose tissue
150
bone element
51
pancreas
8
kidney
8
skeleton
6
limb
1
liver
Project
619
AMP
Genome assembly (visualization)
497
GRCh38
497
hg19
Lab
619
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
619 results
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Clear Filters
total RNA-seq
RNA microarray
ChIP-seq
ATAC-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
body of pancreas
33
endocrine pancreas
16
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