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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
444
total RNA-seq
84
RNA microarray
44
ChIP-seq
8
ATAC-seq
6
single cell RNA-seq
3
snDrop-seq
Assay category
450
Transcription
44
DNA binding
8
DNA accessibility
Target of assay
30
histone
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
545
February, 2021
229
August, 2021
166
May, 2020
163
June, 2019
160
August, 2017
120
July, 2018
95
February, 2023
77
July, 2019
74
October, 2019
66
May, 2022
47
September, 2023
44
October, 2018
43
December, 2017
40
May, 2021
40
November, 2019
38
March, 2020
26
May, 2019
26
November, 2018
25
February, 2020
20
April, 2019
19
April, 2020
15
May, 2023
12
November, 2017
11
October, 2017
8
January, 2021
7
December, 2018
6
April, 2018
6
September, 2017
5
March, 2019
5
May, 2024
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
January, 2019
Available data
496
bam
459
bigWig
452
tsv
89
txt
42
fastq
23
bed narrowPeak
15
bigBed narrowPeak
6
csv
Organism
589
Homo sapiens
Biosample type
589
tissue
96
cell line
50
primary cell
26
in vitro differentiated cells
Organ
467
connective tissue
409
adipose tissue
150
bone element
21
pancreas
8
kidney
8
skeleton
6
limb
1
liver
Project
589
AMP
Genome assembly (visualization)
467
GRCh38
467
hg19
Lab
589
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
589 results
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Clear Filters
total RNA-seq
RNA microarray
ChIP-seq
ATAC-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
body of pancreas
17
subcutaneous adipose tissue
2
12
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