Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RNA microarray
21
ATAC-seq
8
ChIP-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
21
DNA accessibility
8
DNA binding
1
Transcription
Target of assay
5
transcription factor
3
control
Date released
397
November, 2017
266
October, 2019
263
August, 2017
191
August, 2021
163
June, 2019
115
May, 2019
113
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
72
May, 2021
66
May, 2022
50
May, 2020
47
September, 2023
41
November, 2019
40
May, 2024
35
December, 2018
31
February, 2021
30
July, 2019
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
18
March, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
September, 2017
5
March, 2019
4
July, 2018
4
March, 2023
1
August, 2018
1
August, 2022
1
December, 2019
1
October, 2022
Available data
569
bam
tsv
549
bigWig
22
bed narrowPeak
8
tagAlign
6
csv
5
txt
4
bed bedgraph
1
bed bed3
1
bed bed3+
Organism
31
Homo sapiens
Biosample type
primary cell
18
cell line
9
tissue
4
in vitro differentiated cells
Organ
14
artery
14
blood vessel
14
heart
14
vasculature
8
bone element
8
skeleton
6
limb
4
connective tissue
3
liver
Project
31
AMP
Genome assembly (visualization)
27
hg19
22
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
1
inconsistent replicate
files.file_type!
tsv
assay_title!
RNA microarray
biosample_type!
primary cell
BIOSAMPLE
ASSAY
31 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
8
6
HepG2
1
1
iPSC derived cell line
2
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
liver
1
+ See 4 more…
in vitro differentiated cells
adipocyte
4
See all biosamples
Download