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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
18
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
68
DNA binding
28
DNA accessibility
Target of assay
68
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
659
bam
631
bigWig
559
tsv
133
fastq
96
bed narrowPeak
89
txt
73
bigBed narrowPeak
11
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
8
tagAlign
7
bed bedMethyl
7
bigBed bedMethyl
7
csv
4
bed bedgraph
2
bed bed3
Organism
96
Homo sapiens
Biosample type
70
cell line
25
tissue
1
primary cell
Organ
52
liver
12
artery
12
blood
12
blood vessel
12
bodily fluid
12
heart
12
vasculature
8
bone element
8
skeleton
6
limb
4
spleen
3
pancreas
2
brain
2
connective tissue
1
adipose tissue
Project
96
AMP
Genome assembly (visualization)
95
GRCh38
94
hg19
Lab
96
AMP-T2D consortium
Audit category:
1
inconsistent replicate
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
96 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
cell line
HepG2
44
1
GM12878
12
smooth muscle cell of the coronary artery
4
8
iPSC derived cell line
1
tissue
liver
4
2
spleen
3
1
body of pancreas
2
brain
2
distal epiphysis
1
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primary cell
osteoblast
1
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