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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
19
ATAC-seq
5
ChIP-seq
5
single cell RNA-seq
1
DNase-seq
Assay category
20
DNA accessibility
5
DNA binding
5
Transcription
Target of assay
5
transcription factor
Date released
313
November, 2017
210
June, 2019
189
October, 2019
163
August, 2021
142
August, 2017
133
May, 2021
112
February, 2021
97
May, 2019
73
November, 2018
72
December, 2017
70
February, 2023
65
April, 2019
46
September, 2018
45
May, 2022
45
October, 2018
40
May, 2024
37
November, 2019
30
December, 2018
27
May, 2020
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
1
October, 2022
Available data
578
bam
563
tsv
556
bigWig
89
txt
45
fastq
25
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
3
bed bed3+
2
bed bed3
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
114
Homo sapiens
Biosample type
97
tissue
14
cell line
3
primary cell
Organ
92
bone element
12
artery
12
blood vessel
12
heart
12
vasculature
8
skeleton
6
limb
5
kidney
3
connective tissue
1
liver
Project
114
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
114
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
1
inconsistent replicate
BIOSAMPLE
ASSAY
114 results
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RNA microarray
ATAC-seq
ChIP-seq
single cell RNA-seq
DNase-seq
tissue
bone element
84
kidney
5
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 5 more…
cell line
smooth muscle cell of the coronary artery
8
4
HepG2
1
iPSC derived cell line
1
primary cell
osteoblast
2
1
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